BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B11SP1|AL427124
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1258 1880 0.0
>3x_Contig1258
Length = 6899
Score = 1880 bits (947), Expect = 0.0
Identities = 960/966 (99%)
Strand = Plus / Plus
Query: 1 atcaaggtgatagtttgtcgtaacatatttctttttgccaaagcgacattttccttctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3743 atcaaggtgatagtttgtcgtaacatatttctttttgccaaagcgacattttccttctag 3802
Query: 61 tatgcatttatacaaaattgggaaaatggtactcggaagcgcastgtncattgtttctgc 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3803 tatgcatttatacaaaattgggaaaatggtactcggaagcgcagctgtcattgtttctgc 3862
Query: 121 ttcactgggcgctctatatttgtaccaaaacaagcttatatacccatcttgggcacaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 ttcactgggcgctctatatttgtaccaaaacaagcttatatacccatcttgggcacaagg 3922
Query: 181 tgctagagaccatgtagatacgccagatcaatacggtttgccttatgaagatctcacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 tgctagagaccatgtagatacgccagatcaatacggtttgccttatgaagatctcacttt 3982
Query: 241 aacgacttcggatggtgttctattgaaagcatttgatataaggaatgaaaattcgactgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 aacgacttcggatggtgttctattgaaagcatttgatataaggaatgaaaattcgactgc 4042
Query: 301 aaccatgcttgttctttgccccaatgcggggaatataggatatttcctgcccgttgctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4043 aaccatgcttgttctttgccccaatgcggggaatataggatatttcctgcccgttgctag 4102
Query: 361 gtttctctataatgagtttaatttgtccatttttttgtattcctatcgtggatatgggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4103 gtttctctataatgagtttaatttgtccatttttttgtattcctatcgtggatatgggtt 4162
Query: 421 atcaacagggttcccatcggagagaggattgaagatagacgcagataccgtcatggacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4163 atcaacagggttcccatcggagagaggattgaagatagacgcagataccgtcatggacca 4222
Query: 481 tttgacaaacagtgaatttcataaatcaaggaagctaatactttatgggaggtcccttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4223 tttgacaaacagtgaatttcataaatcaaggaagctaatactttatgggaggtcccttgg 4282
Query: 541 tggcgctaatgccatttatcttgctagaaaatttaccgatatctgcgatgccattatcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4283 tggcgctaatgccatttatcttgctagaaaatttaccgatatctgcgatgccattatcct 4342
Query: 601 agaaaatactttcctgtccattcgcaaagttatcccatacgttttcccaatgctgaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4343 agaaaatactttcctgtccattcgcaaagttatcccatacgttttcccaatgctgaagaa 4402
Query: 661 tgtggcattcatgtgtcatgaagtctgggattctgaacaggaaattgtcaacatacaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4403 tgtggcattcatgtgtcatgaagtctgggattctgaacaggaaattgtcaacatacaaga 4462
Query: 721 tgatactttacctttcttgtttcttgctggtttaagagatgagattgtcccaccccctca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 tgatactttacctttcttgtttcttgctggtttaagagatgagattgtcccaccccctca 4522
Query: 781 tatgaaattattgtataaactatgtccctcgagctgcaaaagatttattgagttccctat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 tatgaaattattgtataaactatgtccctcgagctgcaaaagatttattgagttccctat 4582
Query: 841 cggttcccataacgacacgataatacaagatgggtattgggttgtcgttaaagagttctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 cggttcccataacgacacgataatacaagatgggtattgggttgtcgttaaagagttctt 4642
Query: 901 acaaaaacataacttgatatagaaaaratccgaattaacaggaaattgacttcagaataa 960
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4643 acaaaaacataacttgatatagaaaagatccgaattaacaggaaattgacttcagaataa 4702
Query: 961 gattgc 966
||||||
Sbjct: 4703 gattgc 4708
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6816
Number of Sequences: 1807
Number of extensions: 6816
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)